A SaaS for quantitative analysis of 3d images



Main reference:

F. Brun, L. Mancini, P. Kasae, S. Favretto, D. Dreossi, G. Tromba. Pore3D: A software library for quantitative analysis of porous media. Nuclear Instruments and Methods in Physics Research A, vol. 615, nr. 3, pp. 326-332. 2010.



F. Brun et al. Effective implementation of ring artifacts removal filters for synchrotron radiation microtomographic images. Proc. of the 8th International Symposium on Image and Signal Processing (ISPA), pp. 672-676, Sept. 4-6, Trieste (Italy), 2013. Additional material.

F. Brun et al. A comparative evaluation of ring artifacts reduction filters for X-ray computed microtomography images. Proc. of the 18th IEEE International Conference on Image Processing (ICIP), pp. 405-408, Sept. 11-14, Bruxelles (Belgium), 2011. Additional material.

F. Brun and D. Dreossi. Efficient curve-skeleton computation for the analysis of biomedical 3D images . Biomedical Sciences Instrumentation, vol. 46, pp. 475-480, 2010.

F. Brun et al. An improved method for ring artifacts removing in reconstructed tomographic images. IFMBE Proceedings - World Congress on Medical Physics and Biomedical Engineering, Vol. 25/4, September 7 - 12, 2009, Munich, Germany, pp. 926-929.


Selected applications:

D.R. Baker et al. A four-dimensional X-ray tomographic microscopy study of bubble growth in basaltic foam. Nature Communications, vol. 3 , art. no. 1135, 2012.

S. Tavella et al. Bone turnover in wild type and pleiotrophin-transgenic mice housed for three months in the international space station (ISS). PLoS ONE, vol. 7, no. 3, art. no. e33179, 2012.

D. Pasqualini et al. Computed micro-tomographic evaluation of glide path with nickel-titanium rotary pathfile in maxillary first molars curved canals. Journal of Endodontics, vol. 38, no. 3, pp. 389-393, 2012.

F. Brun et al. Automated quantitative characterization of alginate/hydroxyapatite bone tissue engineering scaffolds by means of micro-CT image analysis. Journal of Materials Science: Materials in Medicine, vol. 22, no. 12, pp. 2617-2629, 2011.

E. Larsson et al. Quantification of structural differences in the human calvarium diploe by means of x-ray computed microtomography image analysis: A case study, IFMBE Proceedings vol. 37, pp. 599-602, 2011.

M. Voltolini et al. Synchrotron X-ray computed microtomography investigation of a mortar affected by alkali-silica reaction: a quantitative characterization of its microstructural features. Journal of Materials Science, vol. 46, no. 20, pp. 6633-6641, 2011.

S. Puce et al. Three-dimensional analysis of the canal network of an Indonesian Stylaster (Cnidaria, Hydrozoa, Stylasteridae) by means of X-ray computed microtomography. Zoomorphology, vol. 130, no. 2, pp. 85-95, 2011.

M. Voltolini et al. Texture analysis of volcanic rock samples: Quantitative study of crystals and vesicles shape preferred orientation from X-ray microtomography data. Journal of Volcanology and Geothermal Research, vol. 201. no 1-2, pp. 83-95, 2011.

P. Pittia et al. Evaluation of microstructural properties of coffee beans by synchrotron X-ray microtomography: a methodological approach. Journal of Food Science, vol. 76, no. 2, pp. E222-E231, 2011.

J. Kaiser et al. Investigation of the microstructure and mineralogical composition of urinary calculi fragments by synchrotron radiation X-ray microtomography - a feasibility study. Urological Research, vol. 39, no. 4, pp. 259-267, 2011.

D. Zandomeneghi et al. Quantitative analysis of X-ray microtomography images of geomaterials: application to volcanic rocks. Geosphere, vol. 6, no. 6, pp. 793-804, 2010.

G. Tromba et al. The SYRMEP Beamline of Elettra: Clinical Mammography and Bio-medical Applications. 6th International Conference On Medical Applications of Synchrotron Radiation (MASR), AIP Conference Proceedings, vol. 1266, no. 1, pp. 18-23, 2010.