XRD2 Publications
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A list of publications in which data was collected at the XRD2 beamline. All these publications can be found (and added) in the publications area in the Virtual Unified Office (VUO) web page, after registration. Every year, ELETTRA publishes 'ELETTRA Highlights' reporting a selection of the work done at the Laboratory during the last twelve months. In this page you will find a brief presentation of the experiments done at the XRD2 beamline and present in ELETTRA Highlights, along with other relevant results obtained at the beamline. You can access XRD2 structures released on Protein Data Bank from our BioSync page or this link. |
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2024
- Experimental and Theoretical Insights into a Novel Lightfast Thiophene Azo Dye
Diana R., Sessa L., Concilio S., Piotto S., Di Costanzo L., Carella A., Panunzi B.
Crystals, Vol. 14 - 1, 31 (2024)
doi: 10.3390/cryst14010031 (Journal Article) - Fragment Merging, Growing, and Linking Identify New Trypanothione Reductase Inhibitors for Leishmaniasis
Exertier Cécile, Salerno Alessandra, Antonelli Lorenzo, Fiorillo Annarita, Ocello Riccardo, Seghetti Francesca, Caciolla Jessica, Uliassi Elisa, Masetti Matteo, Fiorentino Eleonora, Orsini Stefania, Di Muccio Trentina, Ilari Andrea, Bolognesi Maria Laura
J. Med. Chem., Vol. 67 - 1, pp. 402-419 (2024)
doi: 10.1021/acs.jmedchem.3c01439 (Journal Article) - Identification of the pyridoxal 5′-phosphate allosteric site in human pyridox(am)ine 5′-phosphate oxidase
Barile Anna, Graziani Claudio, Antonelli Lorenzo, Parroni Alessia, Fiorillo Annarita, di Salvo Martino Luigi, Ilari Andrea, Giorgi Alessandra, Rosignoli Serena, Paiardini Alessandro, Contestabile Roberto, Tramonti Angela
Protein Science, Vol. 33 - 2, p. e4900 (2024)
doi: 10.1002/pro.4900 (Journal Article) - Integrative approach in drug discovery against SARS-CoV2: a biochemical and biophysical study on the Papain-like protease
Morasso S.
(2024)
(Thesis) - Novel Carbonic Anhydrase Inhibitors with Dual-Tail Core Sulfonamide Show Potent and Lasting Effects for Glaucoma Therapy
Angeli Andrea, Chelli Irene, Lucarini Laura, Sgambellone Silvia, Marri Silvia, Villano Serafina, Ferraroni Marta, De Luca Viviana, Capasso Clemente, Carta Fabrizio, Supuran Claudiu T.
J. Med. Chem., Vol. 67 - 4, pp. 3066-3089 (2024)
doi: 10.1021/acs.jmedchem.3c02254 (Journal Article) - Palladium(II)-Imidoyl Complexes: A New Piece in the Puzzle of Organopalladium Anticancer Agents
Bortolamiol Enrica, Novaselich Sofia, Tupini Chiara, Fagnani Sofia, Gambari Roberto, Demitri Nicola, Lampronti Ilaria, Visentin Fabiano, Scattolin Thomas
European Journal of Inorganic Chemistry, Vol. 27 - 8, p. e202300673 (2024)
doi: 10.1002/ejic.202300673 (Journal Article) - Platinum(0)-η2-1,2-(E)ditosylethene Complexes Bearing Phosphine, Isocyanide and N-Heterocyclic Carbene Ligands: Synthesis and Cytotoxicity towards Ovarian and Breast Cancer Cells
Compagno Nicola, Piccolo Rachele, Bortolamiol Enrica, Demitri Nicola, Rizzolio Flavio, Visentin Fabiano, Scattolin Thomas
Molecules, Vol. 29 - 5, pp. 1-18 (2024)
doi: 10.3390/molecules29051119 (Journal Article) - Rational Design of Palladium(II) Indenyl and Allyl Complexes Bearing Phosphine and Isocyanide Ancillary Ligands with Promising Antitumor Activity
Bortolamiol Enrica, Botter Eleonora, Cavarzerani Enrico, Mauceri Matteo, Demitri Nicola, Rizzolio Flavio, Visentin Fabiano, Scattolin Thomas
Molecules, Vol. 29 - 2, p. 345 (2024)
doi: 10.3390/molecules29020345 (Journal Article) - Structural basis for specific inhibition of salicylate synthase from Mycobacterium abscessus
Mori Matteo, Cocorullo Mario, Tresoldi Andrea, Cazzaniga Giulia, Gelain Arianna, Stelitano Giovanni, Chiarelli Laurent R., Tomaiuolo Martina, Delre Pietro, Mangiatordi Giuseppe F., Garofalo Mariangela, Cassetta Alberto, Covaceuszach Sonia, Villa Stefania, Meneghetti Fiorella
European Journal of Medicinal Chemistry, Vol. 265, p. 116073 (2024)
doi: 10.1016/j.ejmech.2023.116073 (Journal Article) - Supramolecular Hydrogels and Water Channels of Differing Diameters from Dipeptide Isomers
Bellotto Ottavia, Scarel Erica, Pierri Giovanni, Rozhin Petr, Kralj Slavko, Polentarutti Maurizio, Bandiera Antonella, Rossi Barbara, Vargiu Attilio V., Tedesco Consiglia, Marchesan Silvia
Biomacromolecules, Vol. 25 - 4, pp. 2476-2485 (2024)
doi: 10.1021/acs.biomac.3c01439 (Journal Article) - Synthetic Approaches to Novel Human Carbonic Anhydrase Isoform Inhibitors Based on Pyrrol-2-one Moiety
Al-Matarneh Cristina M., Pinteala Mariana, Nicolescu Alina, Silion Mihaela, Mocci Francesca, Puf Razvan, Angeli Andrea, Ferraroni Marta, Supuran Claudiu T., Zara Susi, Carradori Simone, Paoletti Niccolò, Bonardi Alessandro, Gratteri Paola
J. Med. Chem., Vol. 67 - 4, pp. 3018-3038 (2024)
doi: 10.1021/acs.jmedchem.3c02190 (Journal Article) - Tau-S214 Phosphorylation Inhibits Fyn Kinase Interaction and Increases the Decay Time of NMDAR-mediated Current
Jos Sneha, Poulose Roshni, Kambaru Archanalakshmi, Gogoi Hemanga, Dalavaikodihalli Nanjaiah Nandakumar, Padmanabhan Balasundaram, Mehta Bhupesh, Padavattan Sivaraman
Journal of Molecular Biology, Vol. 436 - 4, p. 168445 (2024)
doi: 10.1016/j.jmb.2024.168445 (Journal Article) - Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease
Albani Simone, Costanzi Elisa, Hoang Gia Linh, Kuzikov Maria, Frings Marcus, Ansari Narjes, Demitri Nicola, Nguyen Toan T., Rizzi Valerio, Schulz Jörg B., Bolm Carsten, Zaliani Andrea, Carloni Paolo, Storici Paola, Rossetti Giulia
J. Chem. Inf. Model., Vol. 64 - 3, pp. 892-904 (2024)
doi: 10.1021/acs.jcim.3c01497 (Journal Article)
2023
- σ-Hole Interactions Involving a Group 7 Metal: Close Contacts in Neutral and Anionic Rhenium Derivatives
Daolio Andrea, Pizzi Andrea, Calabrese Miriam, Demitri Nicola, Murray Jane S., Politzer Peter, Resnati Giuseppe
Crystal Growth and Design, Vol. 23 - 1, pp. 574-579 (2023)
doi: 10.1021/acs.cgd.2c01180 (Journal Article) - 6-Substituted Triazolyl Benzoxaboroles as Selective Carbonic Anhydrase Inhibitors: In Silico Design, Synthesis, and X-ray Crystallography
Nocentini Alessio, Bonardi Alessandro, Bazzicalupi Carla, Alterio Vincenzo, Esposito Davide, Monti Simona Maria, Smietana Michael, De Simone Giuseppina, Supuran Claudiu T., Gratteri Paola, Winum Jean-Yves
J. Med. Chem., Vol. 66 - 12, pp. 8118-8129 (2023)
doi: 10.1021/acs.jmedchem.3c00433 (Journal Article) - A new and efficient procedure to load bioactive molecules within the human heavy-chain ferritin nanocage
Lucignano R., Stanzione I., Ferraro G., Di Girolamo R., Cané C., Di Somma A., Duilio A., Merlino A., Picone D.
Frontiers in Molecular Biosciences, Vol. 10, 1008985 (2023)
doi: 10.3389/fmolb.2023.1008985 (Journal Article) - A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein
Kumar Ujjwal, Goyal Priya, Madni Zaid K., Kamble Kajal, Gaur Vineet, Rajala Maitreyi S., Salunke Dinakar M.
Journal of Biomedical Science, Vol. 30 - 1, p. 56 (2023)
doi: 10.1186/s12929-023-00950-2 (Journal Article) - Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations
Gupta Arvind Kumar, Singh Kushal, Patidar Yogesh, Sharma Ravish, Sardesai Abhijit A., Reddy Govardhan, Gopal Balasubramanian
ACS Chem. Biol., Vol. 18 - 7, pp. 1487-1499 (2023)
doi: 10.1021/acschembio.2c00921 (Journal Article) - Biological and Catalytic Applications of Pd(II)-Indenyl Complexes Bearing Phosphine and N-Heterocyclic Carbene Ligands
Bortolamiol Enrica, Isetta Giacomo, Caligiuri Isabella, Demitri Nicola, Paganelli Stefano, Rizzolio Flavio, Scattolin Thomas, Visentin Fabiano
European Journal of Inorganic Chemistry, Vol. 26 - 22, p. e202300084 (2023)
doi: 10.1002/ejic.202300084 (Journal Article) - Broad-spectrum coronavirus 3C-like protease peptidomimetic inhibitors effectively block SARS-CoV-2 replication in cells: Design, synthesis, biological evaluation, and X-ray structure determination
Stefanelli Irina, Corona Angela, Cerchia Carmen, Cassese Emilia, Improta Salvatore, Costanzi Elisa, Pelliccia Sveva, Morasso Stefano, Esposito Francesca, Paulis Annalaura, Scognamiglio Sante, Di Leva Francesco Saverio, Storici Paola, Brindisi Margherita, Tramontano Enzo, Cannalire Rolando, Summa Vincenzo
European Journal of Medicinal Chemistry, Vol. 253, p. 115311 (2023)
doi: 10.1016/j.ejmech.2023.115311 (Journal Article) - Cisplatin Binding to Human Serum Transferrin: A Crystallographic Study
Troisi Romualdo, Galardo Francesco, Ferraro Giarita, Sica Filomena, Merlino Antonello
Inorganic Chemistry, Vol. 62 - 2, pp. 675-678 (2023)
doi: 10.1021/acs.inorgchem.2c04206 (Journal Article) - Cisplatin binding to angiogenin protein: new molecular pathways and targets for the drug's anticancer activity
Ferraro Giarita, Sanfilippo Vanessa, Chiaverini Lorenzo, Satriano Cristina, Marzo Tiziano, Merlino Antonello, La Mendola Diego
Dalton Trans., Vol. 52 - 26, pp. 9058-9067 (2023)
doi: 10.1039/D3DT01517C (Journal Article) - Computation meets experiment: identification of highly efficient fibrillating peptides
Sori Lorenzo, Pizzi Andrea, Bergamaschi Greta, Gori Alessandro, Gautieri Alfonso, Demitri Nicola, Soncini Monica, Metrangolo Pierangelo
CrystEngComm, Vol. 25 - 32, pp. 4503-4510 (2023)
doi: 10.1039/D3CE00495C (Journal Article) - Crystal Structure of the Brugia malayi Thymidylate Kinase-dTMP Complex and Small Angle X-ray Scattering Experiments Identifies Changes in the Dimeric Association Compared to the Human Homolog
Vishwakarma J., Sharma V. K., Kumar S., Ramachandran R.
Crystallography Reports, Vol. 68 - 7, pp. 1150-1158 (2023)
doi: 10.1134/S1063774521100400 (Journal Article) - Crystal structure of an L-type lectin domain from archaea
Khan Farha, Kaza Suguna
Proteins: Structure, Function and Bioinformatics, Vol. 91 - 4, pp. 456-465 (2023)
doi: 10.1002/prot.26440 (Journal Article) - Crystal structure of the monocupin ring-cleaving dioxygenase 5-nitrosalicylate 1,2-dioxygenase from Bradyrhizobium sp.
Eppinger Erik, Stolz Andreas, Ferraroni Marta
Acta Crystallographica Section D, Vol. 79 - 7, pp. 632-640 (2023)
doi: 10.1107/S2059798323004199 (Journal Article) - Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment
Kesharwani Sharyu, Raj Prateek, Paul Anju, Roy Koyel, Bhanot Amritansh, Mehta Avani, Gopal Aiswarya, Varshney Umesh, Gopal Balasubramanian, Sundriyal Sandeep
European Journal of Medicinal Chemistry, Vol. 258, p. 115604 (2023)
doi: 10.1016/j.ejmech.2023.115604 (Journal Article) - Design, synthesis, biological evaluation and crystal structure determination of dual modulators of carbonic anhydrases and estrogen receptors
Tinivella Annachiara, Nwachukwu Jerome C., Angeli Andrea, Foschi Francesca, Benatti Anna Laura, Pinzi Luca, Izard Tina, Ferraroni Marta, Erumbi Rangarajan, Christodoulou Michael S., Passarella Daniele, Supuran Claudiu T., Nettles Kendall W., Rastelli Giulio
European Journal of Medicinal Chemistry, Vol. 246, p. 115011 (2023)
doi: 10.1016/j.ejmech.2022.115011 (Journal Article) - Dirhodium tetraacetate binding to a B-DNA double helical dodecamer probed by X-ray crystallography and mass spectrometry
Tito G., Troisi R., Ferraro G., Geri A., Massai L., Messori L., Sica F., Merlino A.
Dalton Transactions, Vol. 52 - 21, pp. 6992-6996 (2023)
doi: 10.1039/d3dt00320e (Journal Article) - Discovery of a novel series of potent carbonic anhydrase inhibitors with selective affinity for μ Opioid receptor for Safer and long-lasting analgesia
Angeli Andrea, Micheli Laura, Turnaturi Rita, Pasquinucci Lorella, Parenti Carmela, Alterio Vincenzo, Di Fiore Anna, De Simone Giuseppina, Monti Simona Maria, Carta Fabrizio, Di Cesare Mannelli Lorenzo, Ghelardini Carla, Supuran Claudiu T.
European Journal of Medicinal Chemistry, Vol. 260, p. 115783 (2023)
doi: 10.1016/j.ejmech.2023.115783 (Journal Article) - Diversely N-substituted benzenesulfonamides dissimilarly bind to human carbonic anhydrases: crystallographic investigations of N-nitrosulfonamides
Angeli Andrea, Ferraroni Marta, Bonardi Alessandro, Supuran Claudiu T., Nocentini Alessio
Journal of Enzyme Inhibition and Medicinal Chemistry, Vol. 38 - 1, p. 2178430 (2023)
doi: 10.1080/14756366.2023.2178430 (Journal Article) - Dual species sphingosine-1-phosphate lyase inhibitors to combine antifungal and anti-inflammatory activities in cystic fibrosis: a feasibility study
Cellini Barbara, Pampalone Gioena, Camaioni Emidio, Pariano Marilena, Catalano Flavia, Zelante Teresa, Dindo Mirco, Macchioni Lara, Di Veroli Alessandra, Galarini Roberta, Paoletti Fabiola, Davidescu Magdalena, Stincardini Claudia, Vascelli Gianluca, Bellet Marina Maria, Saba Julie, Giovagnoli Stefano, Giardina Giorgio, Romani Luigina, Costantini Claudio
Scientific Reports, Vol. 13 - 1, p. 22692 (2023)
doi: 10.1038/s41598-023-50121-4 (Journal Article) - Effect of Equatorial Ligand Substitution on the Reactivity with Proteins of Paddlewheel Diruthenium Complexes: Structural Studies
Terán Aarón, Ferraro Giarita, Sánchez-Peláez Ana E., Herrero Santiago, Merlino Antonello
Inorganic Chemistry, Vol. 62 - 2, pp. 670-674 (2023)
doi: 10.1021/acs.inorgchem.2c04103 (Journal Article) - Evolutionarily conserved cysteines in plant cytosolic seryl-tRNA synthetase are important for its resistance to oxidation
Evic Valentina, Soic Ruzica, Mocibob Marko, Kekez Mario, Houser Josef, Wimmerová Michaela, Matković-Čalogović Dubravka, Gruic-Sovulj Ita, Kekez Ivana, Rokov-Plavec Jasmina
FEBS Letters, Vol. 597 - 23, pp. 2975-2992 (2023)
doi: 10.1002/1873-3468.14748 (Journal Article) - First-in-Class Dual Hybrid Carbonic Anhydrase Inhibitors and Transient Receptor Potential Vanilloid 1 Agonists Revert Oxaliplatin-Induced Neuropathy
Angeli Andrea, Micheli Laura, Carta Fabrizio, Ferraroni Marta, Pirali Tracey, Fernandez Carvajal Asia, Ferrer Montiel Antonio, Di Cesare Mannelli Lorenzo, Ghelardini Carla, Supuran Claudiu T.
Journal of Medicinal Chemistry, Vol. 66 - 2, pp. 1616-1633 (2023)
doi: 10.1021/acs.jmedchem.2c01911 (Journal Article) - First-in-Class Dual Targeting Compounds for the Management of Seizures in Glucose Transporter Type 1 Deficiency Syndrome
Angeli Andrea, Ferraroni Marta, Granchi Carlotta, Minutolo Filippo, Chen Xiaozhuo, Shriwas Pratik, Russo Emilio, Leo Antonio, Selleri Silvia, Carta Fabrizio, Supuran Claudiu T.
J. Med. Chem., Vol. 66 - 14, pp. 10010-10026 (2023)
doi: 10.1021/acs.jmedchem.3c00938 (Journal Article) - Functional characterization of a hypothetical protein (TTHA1873) from Thermus thermophilus
Iyyappan Y., Dhayabaran V., Elayappan M., Chaudhary S.K., Palaniappan C., Kanagaraj S.
Proteins: Structure, Function and Bioinformatics, Vol. 91 - 10, pp. 1427-1436 (2023)
doi: 10.1002/prot.26530 (Journal Article) - Geminal Charge-Assisted Tetrel Bonds in Bis-Pyridinium Methylene Salts
Calabrese Miriam, Pizzi Andrea, Daolio Andrea, Ursini Maurizio, Frontera Antonio, Demitri Nicola, Lenczyk Carsten, Wojciechowski Jakub, Resnati Giuseppe
Crystal Growth and Design, Vol. 23 - 3, pp. 1898-1902 (2023)
doi: 10.1021/acs.cgd.2c01386 (Journal Article) - Highly Efficient Electrochemiluminescence from Imidazole-Based Thermally Activated Delayed Fluorescence Emitters
Pavan Giulio, Morgan Luca, Demitri Nicola, Alberoni Chiara, Scattolin Thomas, Aliprandi Alessandro
Chemistry – A European Journal, Vol. 29 - 55, p. e202301912 (2023)
doi: 10.1002/chem.202301912 (Journal Article) - Human aromatic amino acid decarboxylase is an asymmetric and flexible enzyme: Implication in aromatic amino acid decarboxylase deficiency
Bisello Giovanni, Ribeiro Rui P., Perduca Massimiliano, Belviso Benny Danilo, Polverino de'' Laureto Patrizia, Giorgetti Alejandro, Caliandro Rocco, Bertoldi Mariarita
Protein Science, Vol. 32 - 8, p. e4732 (2023)
doi: 10.1002/pro.4732 (Journal Article) - Implications of Protein Interaction in the Speciation of Potential VIVO–Pyridinone Drugs
Ferraro Giarita, Paolillo Maddalena, Sciortino Giuseppe, Pisanu Federico, Garribba Eugenio, Merlino Antonello
Inorg. Chem., Vol. 62 - 21, pp. 8407-8417 (2023)
doi: 10.1021/acs.inorgchem.3c01041 (Journal Article) - Inside out Porphyridium cruentum: Beyond the Conventional Biorefinery Concept
Liberti Davide, Imbimbo Paola, Giustino Enrica, D’Elia Luigi, Ferraro Giarita, Casillo Angela, Illiano Anna, Pinto Gabriella, Di Meo Maria Chiara, Alvarez-Rivera Gerardo, Corsaro Maria Michela, Amoresano Angela, Zarrelli Armando, Ibáñez Elena, Merlino Antonello, Monti Daria Maria
ACS Sustainable Chemistry and Engineering, Vol. 11 - 1, pp. 381-389 (2023)
doi: 10.1021/acssuschemeng.2c05869 (Journal Article) - Interaction of VIVO–8-hydroxyquinoline species with RNase A: the effect of metal ligands in the protein adduct stabilization
Ferraro Giarita, Vitale Luigi, Sciortino Giuseppe, Pisanu Federico, Garribba Eugenio, Merlino Antonello
Inorg. Chem. Front., Vol. 10 - 17, pp. 5186-5198 (2023)
doi: 10.1039/D3QI01023F (Journal Article) - L-serine biosynthesis in the human central nervous system: Structure and function of phosphoserine aminotransferase
Marchesani Francesco, Zangelmi Erika, Murtas Giulia, Costanzi Elisa, Ullah Raheem, Peracchi Alessio, Bruno Stefano, Pollegioni Loredano, Mozzarelli Andrea, Storici Paola, Campanini Barbara
Protein Science, Vol. 32 - 4, p. e4609 (2023)
doi: 10.1002/pro.4609 (Journal Article) - Luminescent [CO2@Ag20(SAdm)10(CF3COO)10(DMA)2] Nanocluster: Synthetic Strategy and Its Implication Towards White-Light Emission
Mandal Sukhendu, Biswas Sourav, Das Anish Kumar Kumar, Sardar Avirup, Manna Surya Sekhar, Mondal Pradip Kumar, Polentarutti Maurizio, Pathak Biswarup
Nanoscale, Vol. 15 - 18, pp. 8377-8386 (2023)
doi: 10.1039/D3NR01107K (Journal Article) - Non-covalent matere bonds in perrhenates probed via ultrahigh field rhenium-185/187 NMR and zero-field NQR spectroscopy
Xu Yijue, Calabrese Miriam, Demitri Nicola, Pizzi Andrea, Nag Tamali, Hung Ivan, Gan Zhehong, Resnati Giuseppe, Bryce David L.
Chem. Commun., Vol. 59 - 84, pp. 12609-12612 (2023)
doi: 10.1039/D3CC04090A (Journal Article) - Novel N-(Heterocyclylphenyl)benzensulfonamide Sharing an Unreported Binding Site with T-Cell Factor 4 at the β-Catenin Armadillo Repeats Domain as an Anticancer Agent
Nalli Marianna, Di Magno Laura, Wen Yichao, Liu Xin, D’Ambrosio Michele, Puxeddu Michela, Parisi Anastasia, Sebastiani Jessica, Sorato Andrea, Coluccia Antonio, Ripa Silvia, Di Pastena Fiorella, Capelli Davide, Montanari Roberta, Masci Domiziana, Urbani Andrea, Naro Chiara, Sette Claudio, Orlando Viviana, D’Angelo Sara, Biagioni Stefano, Bigogno Chiara, Dondio Giulio, Pastore Arianna, Stornaiuolo Mariano, Canettieri Gianluca, Liu Te, Silvestri Romano, La Regina Giuseppe
ACS Pharmacol. Transl. Sci., Vol. 6 - 7, pp. 1087-1103 (2023)
doi: 10.1021/acsptsci.3c00092 (Journal Article) - Photoredox Annulation of Polycyclic Aromatic Hydrocarbons
Zanetti Davide, Matuszewska Oliwia, Giorgianni Giuliana, Pezzetta Cristofer, Demitri Nicola, Bonifazi Davide
JACS Au, Vol. 3 - 11, pp. 3045-3054 (2023)
doi: 10.1021/jacsau.3c00438 (Journal Article) - Praziquantel meets Niclosamide: A dual-drug Antiparasitic Cocrystal
D''Abbrunzo Ilenia, Bianco Emma, Gigli Lara, Demitri Nicola, Birolo Rebecca, Chierotti Michele R., Škorić Irena, Keiser Jennifer, Häberli Cécile, Voinovich Dario, Hasa Dritan, Perissutti Beatrice
International Journal of Pharmaceutics, Vol. 644, p. 123315 (2023)
doi: 10.1016/j.ijpharm.2023.123315 (Journal Article) - Preparation and Crystallographic Analysis of a Complex of SARS-CoV-2 S-Protein Receptor-Binding Domain with a Virus-Neutralizing Nanoantibody
Boyko K. M., Varfolomeeva L. A., Egorkin N. A., Minyaev M. E., Alekseeva I. A., Favorskaya I. A., Ryabova E. I., Prokofiev V. V., Esmagambetov I. B., Shcheblyakov D. B., Logunov D. Yu., Gintsburg A. L., Popov V. O., Sluchanko N. N.
Crystallography Reports, Vol. 68 - 6, pp. 864-871 (2023)
doi: 10.1134/S1063774523601168 (Journal Article) - Proteomic data and structure analysis combined reveal interplay of structural rigidity and flexibility on selectivity of cysteine cathepsins
Tušar Livija, Loboda Jure, Impens Francis, Sosnowski Piotr, Van Quickelberghe Emmy, Vidmar Robert, Demol Hans, Sedeyn Koen, Saelens Xavier, Vizovišek Matej, Mihelič Marko, Fonović Marko, Horvat Jaka, Kosec Gregor, Turk Boris, Gevaert Kris, Turk Dušan
Communications Biology, Vol. 6 - 1, p. 450 (2023)
doi: 10.1038/s42003-023-04772-8 (Journal Article) - Reevaluation of bromodomain ligands targeting BAZ2A
Cazzanelli Giulia, Vedove Andrea Dalle, Parolin Eleonora, D''Agostino Vito Giuseppe, Unzue Andrea, Nevado Cristina, Caflisch Amedeo, Lolli Graziano
Protein Science, Vol. 32 - 9, p. e4752 (2023)
doi: 10.1002/pro.4752 (Journal Article) - Ruthenium(II)–Arene Complexes with Glycosylated NHC-Carbene Co-Ligands: Synthesis, Hydrolytic Behavior, and Binding to Biological Molecules
Annunziata Alfonso, Cucciolito Maria Elena, Di Ronza Maddalena, Ferraro Giarita, Hadiji Mouna, Merlino Antonello, Ortiz Daniel, Scopelliti Rosario, Fadaei Tirani Farzaneh, Dyson Paul J., Ruffo Francesco
Organometallics, Vol. 42 - 10, pp. 952-964 (2023)
doi: 10.1021/acs.organomet.3c00128 (Journal Article) - SUPRAMOLECULAR SYSTEMS FOR APPLICATION IN RECOGNITION AND SEPARATION PROCESSES
Mobili Riccardo
(2023)
(Thesis) - Stabilization and Binding of [V4O12]4− and Unprecedented [V20O54(NO3)]n− to Lysozyme upon Loss of Ligands and Oxidation of the Potential Drug VIVO(acetylacetonato)2
Ferraro Giarita, Tito Gabriella, Sciortino Giuseppe, Garribba Eugenio, Merlino Antonello
Angewandte Chemie International Edition, Vol. 62 - 50, p. e202310655 (2023)
doi: 10.1002/ange.202310655 (Journal Article) - Steric hindrance and charge influence on the cytotoxic activity and protein binding properties of diruthenium complexes
Terán Aarón, Ferraro Giarita, Imbimbo Paola, Sánchez-Peláez Ana E., Monti Daria Maria, Herrero Santiago, Merlino Antonello
International Journal of Biological Macromolecules, Vol. 253, p. 126666 (2023)
doi: 10.1016/j.ijbiomac.2023.126666 (Journal Article) - Steric hindrance and structural flexibility shape the functional properties of a guanine-rich oligonucleotide
Troisi Romualdo, Napolitano Valeria, Rossitto Emanuele, Osman Waleed, Nagano Masanobu, Wakui Koji, Popowicz Grzegorz M, Yoshimoto Keitaro, Sica Filomena
Nucleic Acids Research, Vol. 51 - 16, pp. 8880-8890 (2023)
doi: 10.1093/nar/gkad634 (Journal Article) - Structural basis for the unique molecular properties of broad-range phospholipase C from Listeria monocytogenes
Petrišič Nejc, Adamek Maksimiljan, Kežar Andreja, Hočevar Samo B., Žagar Ema, Anderluh Gregor, Podobnik Marjetka
Nature Communications, Vol. 14 - 1, p. 6474 (2023)
doi: 10.1038/s41467-023-42134-4 (Journal Article) - Structural insights into DarT toxin neutralization by cognate DarG antitoxin: ssDNA mimicry by DarG C-terminal domain keeps the DarT toxin inhibited
Deep Amar, Singh Latika, Kaur Japleen, Velusamy Maheshwaran, Bhardwaj Pushpanjali, Singh Ramandeep, Thakur Krishan Gopal
Structure, Vol. 31 - 7, pp. 780-789.e4 (2023)
doi: 10.1016/j.str.2023.04.008 (Journal Article) - Structure and interactions of the phloem lectin (phloem protein 2) Cus17 from Cucumis sativus
Bobbili Kishore Babu, Sivaji Nukathoti, Priya Badma, Suguna Kaza, Surolia Avadhesha
Structure, Vol. 31 - 4, pp. 464-479.e5 (2023)
doi: 10.1016/j.str.2023.02.008 (Journal Article) - Study and characterization of polymorphs of BTBT derivatives and their application in organic electronics
Pandey Priya, Pandey Priya
(2023)
doi: 10.48676/unibo/amsdottorato/10928 (Thesis) - Synthesis of a novel tetra-phenol π-extended phenazine and its application as an organo-photocatalyst
Gentile Giuseppe, Bartolomei Beatrice, Dosso Jacopo, Demitri Nicola, Filippini Giacomo, Prato Maurizio
Chem. Commun., Vol. 60 - 5, pp. 602-605 (2023)
doi: 10.1039/D3CC05176E (Journal Article) - Tailoring thermally activated delayed fluorescence emitters for efficient electrochemiluminescence with tripropylamine as coreactant
Morgan Luca, Pavan Giulio, Demitri Nicola, Alberoni Chiara, Scattolin Thomas, Roverso Marco, Bogialli Sara, Aliprandi Alessandro
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(2020)
(Thesis) - Structural and Functional Studies of a Klebsiella Phage Capsule Depolymerase Tailspike: Mechanistic Insights into Capsular Degradation
Squeglia F., Maciejewska B., Łątka A., Ruggiero A., Briers Y., Drulis-Kawa Z., Berisio R.
Structure, Vol. 28 - 6, pp. 613-624.e4 (2020)
doi: 10.1016/j.str.2020.04.015 (Journal Article) - Structural and biochemical characteristics of two Staphylococcus epidermidis RNase J paralogs RNase J1 and RNase J2
Raj Rishi, Nadig Savitha, Patel Twinkal, Gopal Balasubramanian
Journal of Biological Chemistry, Vol. 295 - 49, pp. 16863-16876 (2020)
doi: 10.1074/jbc.ra120.014876 (Journal Article) - Structure of intact chitinase with hevein domain from the plant Simarouba glauca, known for its traditional anti-inflammatory efficacy
Balu Kanal Elamparithi, Ramya K.S., Radha A., Krishnasamy Gunasekaran
International Journal of Biological Macromolecules, Vol. 161 - 8, pp. 1381-1392 (2020)
doi: 10.1016/j.ijbiomac.2020.07.284 (Journal Article) - Studi strutturali sulla proteina DNA primasi umana.
Baldassar S.
(2020)
(Thesis) - The L.donovani Hypoxanthine-guanine phosphoribosyl transferase (HGPRT) oligomer is distinct from the human homolog
Parihar Pankaj Singh, Pratap J. Venkatesh
Biochemical and Biophysical Research Communications, Vol. 532 - 4, pp. 499-504 (2020)
doi: 10.1016/j.bbrc.2020.08.052 (Journal Article) - The anticancer activity of an air-stable Pd(i)-NHC (NHC = N-heterocyclic carbene) dimer
Scattolin Thomas, Bortolamiol Enrica, Palazzolo Stefano, Caligiuri Isabella, Perin Tiziana, Canzonieri Vincenzo, Demitri Nicola, Rizzolio Flavio, Cavallo Luigi, Dereli Busra, Mane Manoj V., Nolan Steven P., Visentin Fabiano
Chemical Communications, Vol. 56 - 81, pp. 12238-12241 (2020)
doi: 10.1039/D0CC03883K (Journal Article) - The heptameric structure of the flagellar regulatory protein FlrC is indispensable for ATPase activity and disassembled by cyclic-di-GMP
Chakraborty Shrestha, Biswas Maitree, Dey Sanjay, Agarwal Shubhangi, Chakrabortty Tulika, Ghosh Biplab, Dasgupta Jhimli
Journal of Biological Chemistry, Vol. 295 - 50, pp. 16960-16974 (2020)
doi: 10.1074/jbc.RA120.014083 (Journal Article) - The structure of clostridioides difficile seca2 atpase exposes regions responsible for differential target recognition of the seca1 and seca2-dependent systems
Lindič N., Loboda J., Usenik A., Vidmar R., Turk D.
International Journal of Molecular Sciences, Vol. 21 - 17, pp. 1-17 (2020)
doi: 10.3390/ijms21176153 (Journal Article) - Three new amidophosphoric acid esters with a P(O)[OCH2C(CH3)2CH2O] segment: X-ray diffraction, DFT, AIM and Hirshfeld surface investigations of bi- and tri-furcated (three and four-center) hydrogen bond interactions
Sadat Bozorgvar M., Tarahhomi A., van der Lee A.
Zeitschrift fur Kristallographie - Crystalline Materials, Vol. 235 - 3, pp. 69-84 (2020)
doi: 10.1515/zkri-2019-0050 (Journal Article) - X-ray structure of C-phycocyanin from Galdieria phlegrea: Determinants of thermostability and comparison with a C-phycocyanin in the entire phycobilisome
Ferraro G., Imbimbo P., Marseglia A., Lucignano R., Monti D.M., Merlino A.
Biochimica et Biophysica Acta - Bioenergetics, Vol. 1861 - 9, p. 148236 (2020)
doi: 10.1016/j.bbabio.2020.148236 (Journal Article)
2019
- A polar filter in DNA polymerases prevents ribonucleotide incorporation
Johnson M.K., Kottur J., Nair D.T.
Nucleic Acids Research, Vol. 47 - 20, pp. 10693-10705 (2019)
doi: 10.1093/nar/gkz792 (Journal Article) - Coordination polymers of Cu(II), Co(II) and Cd(II) based on a tetramethyl-substituted terphenyldicarboxylic acid
Dascalu I.-A., Shova S., Dumitrescu D.G., Roman G., Bratanovici B.-I., Ardeleanu R., Lozan V.
Polyhedron, Vol. 170, pp. 463-470 (2019)
doi: 10.1016/j.poly.2019.05.066 (Journal Article) - Crystal Growth in Gels from the Mechanisms of Crystal Growth to Control of Polymorphism: New Trends on Theoretical and Experimental Aspects
Velásquez-González O., Campos-Escamilla C., Flores-Ibarra A., Esturau-Escofet N., Arreguin-Espinosa R., Stojanoff V., Cuéllar-Cruz M., Moreno A.
Crystals, Vol. 9 - 9, 443 (2019)
doi: 10.3390/cryst9090443 (Journal Article) - Design, Synthesis, Evaluation, and Structural Studies of C2-Symmetric Small Molecule Inhibitors of Programmed Cell Death-1/Programmed Death-Ligand 1 Protein–Protein Interaction
Basu S., Yang J., Xu B., Magiera-Mularz K., Skalniak L., Musielak B., Kholodovych V., Holak T.A., Hu L.
Journal of Medicinal Chemistry, Vol. 62 - 15, pp. 7250-7263 (2019)
doi: 10.1021/acs.jmedchem.9b00795 (Journal Article) - Gain and noise in GaAs/AlGaAs avalanche photodiodes with thin multiplication regions
Nichetti C., Steinhartova T., Antonelli M., Cautero G., Menk R.H., Pilotto A., Driussi F., Palestri P., Selmi L., Arfelli F., Biasiol G.
Journal of Instrumentation, Vol. 14 - 1, C01003 (2019)
doi: 10.1088/1748-0221/14/01/C01003 (Journal Article) - Investigation of the behaviour of GaAs/AlGaAs SAM-APDs for synchrotron radiation
Nichetti C., Steinhartova T., Antonelli M., Cautero G., Menk R.H., Pilotto A., Driussi F., Palestri P., Selmi L., Arfelli F., Biasiol G.
AIP Conference Proceedings, Vol. 2054, 060064 (2019)
doi: 10.1063/1.5084695 (Journal Article) - Molecular recognition between PCNA and proteins involved in DNA replication and repair: p15 and p12
Gonzalez-Magaña A.
(2019)
(Thesis) - Nickel(II) Complexes with Redox Noninnocent Octaazamacrocycles as Catalysts in Oxidation Reactions
Dobrov A., Darvasiová D., Zalibera M., Bučinský L., Puškárová I., Rapta P., Shova S., Dumitrescu D., Martins Luísa M. D. R. S., Pombeiro Armando J. L., Arion V.B.
Inorganic Chemistry, Vol. 58 - 16, pp. 11133-11145 (2019)
doi: 10.1021/acs.inorgchem.9b01700 (Journal Article) - Prospect of Thiazole-based γ-Peptide Foldamers in Enamine Catalysis: Exploration of the Nitro-Michael Addition
Aguesseau-Kondrotas J., Simon M., Legrand B., Bantigniès J.-L., Kang Y.K., Dumitrescu D., Van der Lee A., Campagne J.-M., de Figueiredo R.M., Maillard L.T.
Chemistry - A European Journal, Vol. 25 - 30, pp. 7396-7401 (2019)
doi: 10.1002/chem.201901221 (Journal Article) - Self-Assembled Columnar Triazole Quartets: An Example of Synergistic Hydrogen-Bonding/Anion–π Interactions
Zheng S.-P., Li Y.-H., Jiang J.-J., van der Lee A., Dumitrescu D., Barboiu M.
Angewandte Chemie - International Edition, Vol. 58 - 35, pp. 12037-12042 (2019)
doi: 10.1002/anie.201904808 (Journal Article) - Structural studies on an Archaeal Cdc45RecJ protein
Delsoglio V.
(2019)
(Thesis) - Sulfonamides incorporating piperazine bioisosteres as potent human carbonic anhydrase I, II, IV and IX inhibitors
Chiaramonte N., Bua S., Angeli A., Ferraroni M., Picchioni I., Bartolucci G., Braconi L., Dei S., Teodori E., Supuran C.T., Romanelli M.N.
Bioorganic Chemistry, Vol. 91, 103130 (2019)
doi: 10.1016/j.bioorg.2019.103130 (Journal Article) - The Alkyne Moiety as a Latent Electrophile in Irreversible Covalent Small Molecule Inhibitors of Cathepsin K
Mons E., Jansen I.D.C., Loboda J., van Doodewaerd B.R., Hermans J., Verdoes M., van Boeckel C.A.A., van Veelen P.A., Turk B., Turk D., Ovaa H.
Journal of the American Chemical Society, Vol. 141 - 8, pp. 3507-3514 (2019)
doi: 10.1021/jacs.8b11027 (Journal Article) - The p12 subunit of human polymerase uses an atypical PIP box for molecular recognition of proliferating cell nuclear antigen (PCNA)
Gonzalez-Magaña A., De Opakua A.I., Romano-Moreno M., Murciano-Calles J., Merino N., Luque I., Rojas A.L., Onesti S., Blanco F.J., De Biasio A.
Journal of Biological Chemistry, Vol. 294 - 11, pp. 3947-3956 (2019)
doi: 10.1074/jbc.RA118.006391 (Journal Article) - UBIQUITINA E DEUBIQUITINASI: APPROCCIO METODOLOGICO PER LO SVILUPPO DI SAGGI DI SCREENING DI INIBITORI E TOOLS PER LA CARATTERIZZAZIONE STRUTTURALE
Dibenedetto S.
(2019)
(Thesis)
2018
- The permeation mechanism of organic cations through a CNG mimic channel
Napolitano M.R., Marchesi A., Rodriguez A., De March M., Onesti S., Laio A., Torre V.
PLoS Computational Biology, Vol. 14 - 8, e1006295 (2018)
doi: 10.1371/journal.pcbi.1006295 (Journal Article)
2017
- Structural studies on Archaeal Cdc45 protein
Capra N.
(2017)
(Thesis)
2016
- Structural studies of CNG channels
Barlassina C.
(2016)
(Thesis)
Last Updated on Friday, 24 September 2021 08:45
